PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC233933.1_FGP001
Common NameEREB128, LOC103633819, Zm.145689
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 262aa    MW: 27056.5 Da    PI: 10.2502
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC233933.1_FGP001genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-1798147355
                AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        + GVr+++ +gr++AeIrd + ng  +r++lg+f++ae Aa a+++a+++ +g
  AC233933.1_FGP001  98 FIGVRRRP-WGRFAAEIRDSTRNG--ARVWLGTFDSAEAAAMAYDQAALSARG 147
                        57******.**********44465..***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.78697155IPR001471AP2/ERF domain
SMARTSM003803.0E-3097161IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-2798156IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-2098157IPR016177DNA-binding domain
PfamPF008472.1E-1298147IPR001471AP2/ERF domain
CDDcd000182.08E-1598156No hitNo description
PRINTSPR003674.1E-898109IPR001471AP2/ERF domain
PRINTSPR003674.1E-8121137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MPSILAIKKV NQLQPPFLAP MGHPSSIHSF YLYSEYMATA AAAATSSSSS SSSDSLPFSM  60
VCGDEAPAAV SWRAADAEVS VAAVPGAGLR QAPSKGAFIG VRRRPWGRFA AEIRDSTRNG  120
ARVWLGTFDS AEAAAMAYDQ AALSARGSAA ALNFPVERVQ ESLRALALGG NAAGASASAG  180
GSPVLALKSR HSKRKRRKKS ELLAAAAAKG AAAAAKATAA GGRSQIKNAA AAAEQQRFVV  240
ELEDLGAEYL EELLRISESY SS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-2398156664ATERF1
3gcc_A4e-2398156664ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192197KRKRRK
2192198KRKRRKK
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC233933.1_FG001
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC233933.1_FGP001
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7277020.0KJ727702.1 Zea mays clone pUT5641 AP2-EREBP transcription factor (EREB128) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008653717.10.0PREDICTED: ethylene-responsive transcription factor 15-like
TrEMBLA0A060D6G10.0A0A060D6G1_MAIZE; AP2-EREBP transcription factor (Fragment)
STRINGAC233933.1_FGP0010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-17ethylene response factor 1